Index (Generalized Linear Models 1.0.6 API)

A C D E F G I L M O P R S T U V

A

AbstractLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
AbstractLinkFunction() - Constructor for class com.github.chen0040.glm.links.AbstractLinkFunction
adjustedR2 - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
apply(double[]) - Static method in class com.github.chen0040.glm.maths.Mean
apply(double[], double) - Static method in class com.github.chen0040.glm.maths.StdDev
apply(double[], double) - Static method in class com.github.chen0040.glm.maths.Variance

C

classifiers - Variable in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
classify(DataRow) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
clone() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
Coefficients - Class in com.github.chen0040.glm.solvers: Created by xschen on 18/8/15.
Coefficients() - Constructor for class com.github.chen0040.glm.solvers.Coefficients
com.github.chen0040.glm.enums - package com.github.chen0040.glm.enums
com.github.chen0040.glm.links - package com.github.chen0040.glm.links
com.github.chen0040.glm.maths - package com.github.chen0040.glm.maths
com.github.chen0040.glm.metrics - package com.github.chen0040.glm.metrics
com.github.chen0040.glm.solvers - package com.github.chen0040.glm.solvers
copy(GlmStatistics) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
copy(Coefficients) - Method in class com.github.chen0040.glm.solvers.Coefficients
copy(Glm) - Method in class com.github.chen0040.glm.solvers.Glm
copy(GlmAlgorithm) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
copy(GlmAlgorithm) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
copy(GlmAlgorithm) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
copy(GlmAlgorithm) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
createClassifier(String) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
createClassifiers(DataFrame) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
createSolver(double[][], double[]) - Method in class com.github.chen0040.glm.solvers.Glm

D

DiagonalMatrix(double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp

E

ElementWiseAbs(double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseAdd(double[], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseAdd(double, double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseDivide(double[], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseExp(double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseMinus(double[], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseMinus(double, double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseMultiply(double, double[], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
ElementWiseMultiply(double, double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
evaluateCost - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
evaluateGradient - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm

F

fit(DataFrame) - Method in class com.github.chen0040.glm.solvers.Glm
fit(DataFrame) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier

G

GaussianElimination(double[][], double[][], double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
getAdjustedR2() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getAlpha() - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
getClassifierScore(DataRow, Glm) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
getClassLabels() - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
getCoefficients() - Method in class com.github.chen0040.glm.solvers.Glm
getCoefficients() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
getCoefficients() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
getDescriptors() - Method in class com.github.chen0040.glm.solvers.Coefficients
GetDeterminant(double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
getDistributionFamily() - Method in class com.github.chen0040.glm.solvers.Glm
getDistributionFamily() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
GetInvLink(double) - Method in class com.github.chen0040.glm.links.AbstractLinkFunction
GetInvLink(double) - Method in class com.github.chen0040.glm.links.IdentityLinkFunction
GetInvLink(double) - Method in class com.github.chen0040.glm.links.InverseLinkFunction
GetInvLink(double) - Method in class com.github.chen0040.glm.links.InverseSquaredLinkFunction
GetInvLink(double) - Method in interface com.github.chen0040.glm.links.LinkFunction
GetInvLink(double) - Method in class com.github.chen0040.glm.links.LogitLinkFunction
GetInvLink(double) - Method in class com.github.chen0040.glm.links.LogLinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.AbstractLinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.IdentityLinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.InverseLinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.InverseSquaredLinkFunction
GetInvLinkDerivative(double) - Method in interface com.github.chen0040.glm.links.LinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.LogitLinkFunction
GetInvLinkDerivative(double) - Method in class com.github.chen0040.glm.links.LogLinkFunction
getLikelihood(GlmDistributionFamily, DataFrame, double[]) - Static method in class com.github.chen0040.glm.metrics.GlmLikelihoodFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.AbstractLinkFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.IdentityLinkFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.InverseLinkFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.InverseSquaredLinkFunction
GetLink(double) - Method in interface com.github.chen0040.glm.links.LinkFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.LogitLinkFunction
GetLink(double) - Method in class com.github.chen0040.glm.links.LogLinkFunction
getLinkFunction(GlmDistributionFamily) - Static method in class com.github.chen0040.glm.solvers.GlmAlgorithm
getMaxIters() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
getName() - Method in class com.github.chen0040.glm.solvers.Glm
getR2() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getResiduals() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getResidualStdDev() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getResponseMean() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getResponseVariance() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getRowExchangeOpCount() - Method in class com.github.chen0040.glm.maths.MatrixOp.UpperTriangularMatrixResult
getRSS() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getSolverType() - Method in class com.github.chen0040.glm.solvers.Glm
getStandardErrors() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
getStatistics() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
getTol() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
GetUpperTriangularMatrix(double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
GetUpperTriangularMatrix2(double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
getValues() - Method in class com.github.chen0040.glm.solvers.Coefficients
getVariance(double) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
getVCovMatrix() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
Glm - Class in com.github.chen0040.glm.solvers: Created by xschen on 16/8/15.
Glm(GlmSolverType, GlmDistributionFamily) - Constructor for class com.github.chen0040.glm.solvers.Glm
Glm() - Constructor for class com.github.chen0040.glm.solvers.Glm
GlmAlgorithm - Class in com.github.chen0040.glm.solvers: Created by xschen on 14/8/15.
GlmAlgorithm() - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithm(GlmDistributionFamily, LinkFunction, double[][], double[], LocalSearch) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithm(GlmDistributionFamily, double[][], double[], LocalSearch) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithm(GlmDistributionFamily, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithm(GlmDistributionFamily) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithm(GlmDistributionFamily, double[][], double[], LocalSearch, int) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmAlgorithmIrls - Class in com.github.chen0040.glm.solvers: Created by xschen on 15/8/15.
GlmAlgorithmIrls() - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
GlmAlgorithmIrls(GlmDistributionFamily, LinkFunction, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
GlmAlgorithmIrls(GlmDistributionFamily, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
GlmAlgorithmIrlsQrNewton - Class in com.github.chen0040.glm.solvers: Created by xschen on 15/8/15.
GlmAlgorithmIrlsQrNewton() - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
GlmAlgorithmIrlsQrNewton(GlmDistributionFamily, LinkFunction, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
GlmAlgorithmIrlsQrNewton(GlmDistributionFamily, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
GlmAlgorithmIrlsSvdNewton - Class in com.github.chen0040.glm.solvers: Created by xschen on 15/8/15.
GlmAlgorithmIrlsSvdNewton() - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
GlmAlgorithmIrlsSvdNewton(GlmDistributionFamily, LinkFunction, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
GlmAlgorithmIrlsSvdNewton(GlmDistributionFamily, double[][], double[]) - Constructor for class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
glmCoefficients - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
GlmDistributionFamily - Enum in com.github.chen0040.glm.enums: Created by xschen on 14/8/15.
GlmLikelihoodFunction - Class in com.github.chen0040.glm.metrics: Created by xschen on 15/8/15.
GlmLikelihoodFunction() - Constructor for class com.github.chen0040.glm.metrics.GlmLikelihoodFunction
GlmSolverType - Enum in com.github.chen0040.glm.enums: Created by xschen on 15/8/15.
GlmStatistics - Class in com.github.chen0040.glm.metrics: Created by xschen on 14/8/15.
GlmStatistics() - Constructor for class com.github.chen0040.glm.metrics.GlmStatistics
GlmStatistics(double[][], double[], double[]) - Constructor for class com.github.chen0040.glm.metrics.GlmStatistics
GlmStatistics(int, int) - Constructor for class com.github.chen0040.glm.metrics.GlmStatistics

I

IdentityLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
IdentityLinkFunction() - Constructor for class com.github.chen0040.glm.links.IdentityLinkFunction
inverse(Matrix) - Static method in class com.github.chen0040.glm.solvers.Matrices
InverseLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
InverseLinkFunction() - Constructor for class com.github.chen0040.glm.links.InverseLinkFunction
InverseSquaredLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
InverseSquaredLinkFunction() - Constructor for class com.github.chen0040.glm.links.InverseSquaredLinkFunction
isShuffleData() - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier

L

linear() - Static method in class com.github.chen0040.glm.solvers.Glm
linkFunc - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
LinkFunction - Interface in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
logistic() - Static method in class com.github.chen0040.glm.solvers.Glm
LogitLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
LogitLinkFunction() - Constructor for class com.github.chen0040.glm.links.LogitLinkFunction
LogLinkFunction - Class in com.github.chen0040.glm.links: Created by xschen on 14/8/15.
LogLinkFunction() - Constructor for class com.github.chen0040.glm.links.LogLinkFunction

M

MACHEPS - Static variable in class com.github.chen0040.glm.solvers.Matrices: The difference between 1 and the smallest exactly representable number greater than one.
makeCopy() - Method in class com.github.chen0040.glm.links.AbstractLinkFunction
makeCopy() - Method in class com.github.chen0040.glm.links.IdentityLinkFunction
makeCopy() - Method in class com.github.chen0040.glm.links.InverseLinkFunction
makeCopy() - Method in class com.github.chen0040.glm.links.InverseSquaredLinkFunction
makeCopy() - Method in interface com.github.chen0040.glm.links.LinkFunction
makeCopy() - Method in class com.github.chen0040.glm.links.LogitLinkFunction
makeCopy() - Method in class com.github.chen0040.glm.links.LogLinkFunction
makeCopy() - Method in class com.github.chen0040.glm.solvers.Coefficients
makeCopy() - Method in class com.github.chen0040.glm.solvers.Glm
makeCopy() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
makeCopy() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
makeCopy() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
makeCopy() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
Matrices - Class in com.github.chen0040.glm.solvers: Created by xschen on 24/5/2017.
Matrices() - Constructor for class com.github.chen0040.glm.solvers.Matrices
matrix() - Method in class com.github.chen0040.glm.maths.MatrixOp.UpperTriangularMatrixResult
MatrixOp - Class in com.github.chen0040.glm.maths: Created by xschen on 14/8/15.
MatrixOp() - Constructor for class com.github.chen0040.glm.maths.MatrixOp
MatrixOp.UpperTriangularMatrixResult - Class in com.github.chen0040.glm.maths
maxIters - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
mDistributionFamily - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
Mean - Class in com.github.chen0040.glm.maths: Created by xschen on 14/8/15.
Mean() - Constructor for class com.github.chen0040.glm.maths.Mean
mRegularizationLambda - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
mStats - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
mTol - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
Multiply(double[][], double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
Multiply(double[][], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
Multiply(double[], double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp

O

oneVsOne() - Static method in class com.github.chen0040.glm.solvers.Glm
oneVsOne(Supplier<Glm>) - Static method in class com.github.chen0040.glm.solvers.Glm
OneVsOneGlmClassifier - Class in com.github.chen0040.glm.solvers: Created by xschen on 8/20/2015 0020.
OneVsOneGlmClassifier(List<String>) - Constructor for class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
OneVsOneGlmClassifier() - Constructor for class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
OneVsOneGlmClassifier(Supplier<Glm>) - Constructor for class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier

P

pinv(Matrix) - Static method in class com.github.chen0040.glm.solvers.Matrices: Computes the Moore–Penrose pseudoinverse using the SVD method.
predict(double[]) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm

R

R2 - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
R2() - Method in class com.github.chen0040.glm.metrics.GlmStatistics
remerge(List<DataFrame>, int) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
reset() - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
residuals - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
residualStdDev - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
responseMean - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
responseVariance - Variable in class com.github.chen0040.glm.metrics.GlmStatistics

S

score(DataRow) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
setAdjustedR2(double) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
setAlpha(double) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
setDescriptors(List<String>) - Method in class com.github.chen0040.glm.solvers.Coefficients
setDistributionFamily(GlmDistributionFamily) - Method in class com.github.chen0040.glm.solvers.Glm
setMaxIters(int) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
setR2(double) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
setResidualStdDev(double) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
setResponseMean(double) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
setResponseVariance(double) - Method in class com.github.chen0040.glm.metrics.GlmStatistics
setShuffleData(boolean) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
setSolverType(GlmSolverType) - Method in class com.github.chen0040.glm.solvers.Glm
setTol(double) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
setValues(List<Double>) - Method in class com.github.chen0040.glm.solvers.Coefficients
shouldTerminate - Variable in class com.github.chen0040.glm.solvers.GlmAlgorithm
showStatistics() - Method in class com.github.chen0040.glm.solvers.Glm
size() - Method in class com.github.chen0040.glm.solvers.Coefficients
solve() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithm
solve() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrls
solve() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
solve() - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
split(DataFrame, int) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
standardErrors - Variable in class com.github.chen0040.glm.metrics.GlmStatistics
StdDev - Class in com.github.chen0040.glm.maths: Created by xschen on 14/8/15.
StdDev() - Constructor for class com.github.chen0040.glm.maths.StdDev
Summary(double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp
Summary(double[]) - Static method in class com.github.chen0040.glm.maths.MatrixOp

T

toString() - Method in class com.github.chen0040.glm.solvers.Coefficients
transform(DataRow) - Method in class com.github.chen0040.glm.solvers.Glm
transform(DataRow) - Method in class com.github.chen0040.glm.solvers.OneVsOneGlmClassifier
Transpose(double[][]) - Static method in class com.github.chen0040.glm.maths.MatrixOp

U

updateMacheps() - Static method in class com.github.chen0040.glm.solvers.Matrices: Updates MACHEPS for the executing machine.
updateStatistics(double[]) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsQrNewton
updateStatistics(double[]) - Method in class com.github.chen0040.glm.solvers.GlmAlgorithmIrlsSvdNewton
UpperTriangularMatrixResult(double[][], int) - Constructor for class com.github.chen0040.glm.maths.MatrixOp.UpperTriangularMatrixResult

V

valueOf(String) - Static method in enum com.github.chen0040.glm.enums.GlmDistributionFamily: Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum com.github.chen0040.glm.enums.GlmSolverType: Returns the enum constant of this type with the specified name.
values() - Static method in enum com.github.chen0040.glm.enums.GlmDistributionFamily: Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum com.github.chen0040.glm.enums.GlmSolverType: Returns an array containing the constants of this enum type, in the order they are declared.
Variance - Class in com.github.chen0040.glm.maths: Created by xschen on 14/8/15.
Variance() - Constructor for class com.github.chen0040.glm.maths.Variance
VcovMatrix - Variable in class com.github.chen0040.glm.metrics.GlmStatistics

A C D E F G I L M O P R S T U V