Uses of Interface
sequence.Sequence

Packages that use Sequence

Package	Description
sequence

Uses of Sequence in sequence

Classes in sequence that implement Sequence

Modifier and Type	Class	Description
class	DiskSequence
class	MemorySequence	An immutable sequence that is stored completely in memory.

Methods in sequence with parameters of type Sequence

Modifier and Type	Method	Description
List<Long>	DiskSequence.getMatchingPositions(Sequence kmer)
List<Long>	MemorySequence.getMatchingPositions(Sequence kmer)
List<Long>	Sequence.getMatchingPositions(Sequence kmer)	Gets positions of the sequence that matches with k-mer.