com.github.jessemull.microflexinteger.stat

Class N

java.lang.Object

com.github.jessemull.microflexinteger.stat.N

public class N
extends Object

This class returns the number of data points in integer plate stacks, plates, wells and well sets.

Statistical operations can be performed on stacks, plates, sets and wells using standard or aggregated functions. Standard functions calculate the desired statistic for each well in the stack, plate or set. Aggregated functions aggregate the values from all the wells in the stack, plate or set and perform the statistical operation on the aggregated values. Both standard and aggregated functions can be performed on a subset of data within the stack, plate, set or well.

The methods within the MicroFlex library are meant to be flexible and the descriptive statistic object supports operations using a single stack, plate, set or well as well as collections and arrays of stacks, plates, sets or wells.

Operation	Beginning Index	Length of Subset	Input/Output
Standard	+/-	+/-	Accepts a single well, set, plate or stack as input Calculates the statistic for each well in a well, set, plate or stack
Aggregated	+/-	+/-	Accepts a single well/set/plate/stack or a collection/array of wells/sets/plates/stacks as input Aggregates the data from all the wells in a well/set/plate/stack and calculates the statistic using the aggregated data

Author:

Jesse L. Mull

Constructor Summary

Constructors

Constructor and Description
N()

Method Summary

Modifier and Type	Method and Description
Map<Well,Integer>	plate(Plate plate) Returns the number of data points for each plate well.
Map<Plate,Integer>	platesAggregated(Collection<Plate> collection) Returns the aggregated number of data points for each plate.
int	platesAggregated(Plate plate) Returns the aggregated number of data points for the plate.
Map<Plate,Integer>	platesAggregated(Plate[] array) Returns the aggregated number of data points for each plate.
Map<Well,Integer>	set(WellSet set) Returns the number of data points for each well in the well set.
Map<WellSet,Integer>	setsAggregated(Collection<WellSet> collection) Returns the aggregated number of data points for each well set.
int	setsAggregated(WellSet set) Returns the aggregated number of data points for the well set.
Map<WellSet,Integer>	setsAggregated(WellSet[] array) Returns the aggregated number of data points for each well set.
int	well(Well well) Returns the number of well data points.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

N

public N()

Method Detail

plate

public Map<Well,Integer> plate(Plate plate)

Returns the number of data points for each plate well.

Parameters:

Plate - the plate

Returns:

map of wells and results

platesAggregated

public int platesAggregated(Plate plate)

Returns the aggregated number of data points for the plate.

Parameters:

Plate - the plate

Returns:

the aggregated result

platesAggregated

public Map<Plate,Integer> platesAggregated(Collection<Plate> collection)

Returns the aggregated number of data points for each plate.

Parameters:

Collection - collection of plates

Returns:

map of plates and aggregated results

platesAggregated

public Map<Plate,Integer> platesAggregated(Plate[] array)

Returns the aggregated number of data points for each plate.

Parameters:

PlateInteger[] - array of plates

Returns:

map of plates and aggregated results

set

public Map<Well,Integer> set(WellSet set)

Returns the number of data points for each well in the well set.

Parameters:

WellSet - the well set

Returns:

map of wells and results

setsAggregated

public int setsAggregated(WellSet set)

Returns the aggregated number of data points for the well set.

Parameters:

WellSet - the well set

Returns:

the aggregated result

setsAggregated

public Map<WellSet,Integer> setsAggregated(Collection<WellSet> collection)

Returns the aggregated number of data points for each well set.

Parameters:

Collection - collection of well sets

Returns:

map of well sets and aggregated results

setsAggregated

public Map<WellSet,Integer> setsAggregated(WellSet[] array)

Returns the aggregated number of data points for each well set.

Parameters:

WellSetInteger[] - array of well sets

Returns:

map of well sets and aggregated results

well

public int well(Well well)

Returns the number of well data points.

Parameters:

Well - the well

Returns:

the result