Hierarchy For All Packages

Package Hierarchies:

• demo,
• org.biojava.nbio.aaproperties,
• org.biojava.nbio.aaproperties.profeat,
• org.biojava.nbio.aaproperties.profeat.convertor,
• org.biojava.nbio.aaproperties.xml

Class Hierarchy

• java.lang.Object
  • org.biojava.nbio.aaproperties.xml.AminoAcidComposition
  • org.biojava.nbio.aaproperties.xml.AminoAcidCompositionTable
  • demo.BioJavaAADemo
  • org.biojava.nbio.aaproperties.xml.CaseFreeAminoAcidCompoundSet (implements org.biojava.nbio.core.sequence.template.CompoundSet<C>)
  • org.biojava.nbio.aaproperties.CommandPrompt
  • org.biojava.nbio.aaproperties.Constraints
  • org.biojava.nbio.aaproperties.profeat.convertor.Convertor
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2Charge
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2Hydrophobicity
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2NormalizedVanDerWaalsVolume
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2Polarity
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2Polarizability
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2SecondaryStructure
    • org.biojava.nbio.aaproperties.profeat.convertor.Convert2SolventAccessibility
  • org.biojava.nbio.aaproperties.xml.Element
  • org.biojava.nbio.aaproperties.xml.ElementTable
  • org.biojava.nbio.aaproperties.xml.Isotope
  • org.biojava.nbio.aaproperties.xml.ModifiedAminoAcidCompoundSet (implements org.biojava.nbio.core.sequence.template.CompoundSet<C>)
  • org.biojava.nbio.aaproperties.xml.MyValidationEventHandler (implements javax.xml.bind.ValidationEventHandler)
  • org.biojava.nbio.aaproperties.xml.Name2Count
  • org.biojava.nbio.aaproperties.PeptideProperties
  • org.biojava.nbio.aaproperties.PeptidePropertiesImpl (implements org.biojava.nbio.aaproperties.IPeptideProperties)
  • org.biojava.nbio.aaproperties.profeat.ProfeatProperties
  • org.biojava.nbio.aaproperties.profeat.ProfeatPropertiesImpl (implements org.biojava.nbio.aaproperties.profeat.IProfeatProperties)
  • javax.xml.bind.SchemaOutputResolver
    • org.biojava.nbio.aaproperties.xml.SchemaGenerator
  • org.biojava.nbio.aaproperties.Utils

Interface Hierarchy

• org.biojava.nbio.aaproperties.IPeptideProperties
• org.biojava.nbio.aaproperties.profeat.IProfeatProperties

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.biojava.nbio.aaproperties.CommandPrompt.PropertyName
    • org.biojava.nbio.aaproperties.profeat.IProfeatProperties.ATTRIBUTE
    • org.biojava.nbio.aaproperties.profeat.IProfeatProperties.DISTRIBUTION
    • org.biojava.nbio.aaproperties.profeat.IProfeatProperties.GROUPING
    • org.biojava.nbio.aaproperties.profeat.IProfeatProperties.TRANSITION
    • org.biojava.nbio.aaproperties.PeptideProperties.SingleLetterAACode