Uses of Interface
org.biojava.nbio.alignment.template.GuideTreeNode

Packages that use GuideTreeNode

Package	Description
org.biojava.nbio.alignment
org.biojava.nbio.alignment.template

Uses of GuideTreeNode in org.biojava.nbio.alignment

Classes in org.biojava.nbio.alignment that implement GuideTreeNode

Modifier and Type	Class and Description
class	GuideTree.Node Implements a data structure for the node in a guide tree used during progressive multiple sequence alignment.

Methods in org.biojava.nbio.alignment that return GuideTreeNode

Modifier and Type	Method and Description
GuideTreeNode<S,C>	GuideTree.Node.getChild1()
GuideTreeNode<S,C>	GuideTree.Node.getChild2()
GuideTreeNode<S,C>	GuideTree.Node.getChildAt(int childIndex)
GuideTreeNode<S,C>	GuideTree.Node.getParent()

Methods in org.biojava.nbio.alignment that return types with arguments of type GuideTreeNode

Modifier and Type	Method and Description
Enumeration<GuideTreeNode<S,C>>	GuideTree.Node.children()
Iterator<GuideTreeNode<S,C>>	GuideTree.iterator() Returns a post-order Iterator that traverses the tree from leaves to root.

Uses of GuideTreeNode in org.biojava.nbio.alignment.template

Methods in org.biojava.nbio.alignment.template that return GuideTreeNode

Modifier and Type	Method and Description
GuideTreeNode<S,C>	GuideTreeNode.getChild1() Returns the first child node of this node.
GuideTreeNode<S,C>	GuideTreeNode.getChild2() Returns the second child node of this node.
GuideTreeNode<S,C>	HierarchicalClusterer.getRoot() Returns the root node of the tree resulting from this clustering algorithm.