Uses of Class
org.biojava.nbio.core.search.io.blast.BlastResultBuilder

Packages that use BlastResultBuilder

Package	Description
org.biojava.nbio.core.search.io.blast

Uses of BlastResultBuilder in org.biojava.nbio.core.search.io.blast

Methods in org.biojava.nbio.core.search.io.blast that return BlastResultBuilder

Modifier and Type	Method and Description
BlastResultBuilder	BlastResultBuilder.setDbFile(String dbFile)
BlastResultBuilder	BlastResultBuilder.setHits(List<Hit> hits)
BlastResultBuilder	BlastResultBuilder.setIterationNumber(int iterationNumber)
BlastResultBuilder	BlastResultBuilder.setProgram(String program)
BlastResultBuilder	BlastResultBuilder.setProgramSpecificParameters(HashMap<String,String> programSpecificParameters)
BlastResultBuilder	BlastResultBuilder.setQueryDef(String queryDef)
BlastResultBuilder	BlastResultBuilder.setQueryID(String queryID)
BlastResultBuilder	BlastResultBuilder.setQueryLength(int queryLength)
BlastResultBuilder	BlastResultBuilder.setQuerySequence(Sequence s)
BlastResultBuilder	BlastResultBuilder.setReference(String reference)
BlastResultBuilder	BlastResultBuilder.setVersion(String version)