| Package | Description |
|---|---|
| org.biojava.nbio.core.sequence.loader | |
| org.biojava.nbio.core.sequence.storage |
| Class and Description |
|---|
| ArrayListSequenceReader
Stores a Sequence as a collection of compounds in an ArrayList
|
| Class and Description |
|---|
| BitSequenceReader
An implementation of the popular bit encodings.
|
| BitSequenceReader.BitArrayWorker
The logic of working with a bit has been separated out into this class
to help developers create the bit data structures without having to
put the code into an intermediate format and to also use the format
without the need to copy this code.
|
| FourBitSequenceReader.FourBitArrayWorker
A four bit per compound implementation of the bit array worker code.
|
| TwoBitSequenceReader.TwoBitArrayWorker
Extension of the BitArrayWorker which provides the 2bit implementation
code.
|
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