Serialized Form

Package org.biojava.nbio.genome.parsers.cytoband

Class org.biojava.nbio.genome.parsers.cytoband.Cytoband extends java.lang.Object implements Serializable

serialVersionUID:

2805976387404499650L

Serialized Fields

chromosome

java.lang.String chromosome

start

java.lang.Integer start

end

java.lang.Integer end

locus

java.lang.String locus

type

StainType type

Package org.biojava.nbio.genome.parsers.genename

Class org.biojava.nbio.genome.parsers.genename.GeneChromosomePosition extends java.lang.Object implements Serializable

serialVersionUID:

-6886306238993367835L

Serialized Fields

geneName

java.lang.String geneName

genebankId

java.lang.String genebankId

chromosome

java.lang.String chromosome

orientation

java.lang.Character orientation

transcriptionStart

java.lang.Integer transcriptionStart

transcriptionEnd

java.lang.Integer transcriptionEnd

cdsStart

java.lang.Integer cdsStart

cdsEnd

java.lang.Integer cdsEnd

exonCount

int exonCount

exonStarts

java.util.List<E> exonStarts

exonEnds

java.util.List<E> exonEnds

Class org.biojava.nbio.genome.parsers.genename.GeneName extends java.lang.Object implements Serializable

serialVersionUID:

-7163977639324764020L

Serialized Fields

hgncId

java.lang.String hgncId

approvedSymbol

java.lang.String approvedSymbol

approvedName

java.lang.String approvedName

status

java.lang.String status

previousSymbols

java.lang.String previousSymbols

previousNames

java.lang.String previousNames

synonyms

java.lang.String synonyms

chromosome

java.lang.String chromosome

accessionNr

java.lang.String accessionNr

refseqIds

java.lang.String refseqIds

uniprot

java.lang.String uniprot

omimId

java.lang.String omimId

ensemblGeneId

java.lang.String ensemblGeneId

Package org.biojava.nbio.genome.parsers.gff

Class org.biojava.nbio.genome.parsers.gff.FeatureList extends java.util.ArrayList<FeatureI> implements Serializable

Serialized Fields

featindex

java.util.Map<K,V> featindex

mLocation

Location mLocation