Serialized Form

Package org.biojava.nbio.genome.parsers.cytoband

Class org.biojava.nbio.genome.parsers.cytoband.Cytoband

class Cytoband extends Object implements Serializable

serialVersionUID:

2805976387404499650L

Serialized Fields

chromosome

String chromosome

end

Integer end

locus

String locus

start

Integer start

type

StainType type

Package org.biojava.nbio.genome.parsers.genename

Class org.biojava.nbio.genome.parsers.genename.GeneChromosomePosition

class GeneChromosomePosition extends Object implements Serializable

serialVersionUID:

-6886306238993367835L

Serialized Fields

cdsEnd

Integer cdsEnd

cdsStart

Integer cdsStart

chromosome

String chromosome

exonCount

int exonCount

exonEnds

List<Integer> exonEnds

exonStarts

List<Integer> exonStarts

genebankId

String genebankId

geneName

String geneName

orientation

Character orientation

transcriptionEnd

Integer transcriptionEnd

transcriptionStart

Integer transcriptionStart

Class org.biojava.nbio.genome.parsers.genename.GeneName

class GeneName extends Object implements Serializable

serialVersionUID:

-7163977639324764020L

Serialized Fields

accessionNr

String accessionNr

approvedName

String approvedName

approvedSymbol

String approvedSymbol

chromosome

String chromosome

ensemblGeneId

String ensemblGeneId

hgncId

String hgncId

omimId

String omimId

previousNames

String previousNames

previousSymbols

String previousSymbols

refseqIds

String refseqIds

status

String status

synonyms

String synonyms

uniprot

String uniprot

Package org.biojava.nbio.genome.parsers.gff

Class org.biojava.nbio.genome.parsers.gff.FeatureList

class FeatureList extends ArrayList<FeatureI> implements Serializable

Serialized Fields

featindex

Map<String,Map<String,List<FeatureI>>> featindex

mLocation

Location mLocation