org.biojava.spark.mappers

Class PdbIdToMmtf

java.lang.Object

org.biojava.spark.mappers.PdbIdToMmtf

All Implemented Interfaces:

Serializable, org.apache.spark.api.java.function.PairFunction<String,String,byte[]>

public class PdbIdToMmtf
extends Object
implements org.apache.spark.api.java.function.PairFunction<String,String,byte[]>

Generate the internal data structure (using biojava) from a PDB code.

Author:

Anthony Bradley

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
PdbIdToMmtf(String producer) Constructor to provide the producer.

Method Summary

Modifier and Type	Method and Description
scala.Tuple2<String,byte[]>	call(String t)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PdbIdToMmtf

public PdbIdToMmtf(String producer)

Constructor to provide the producer.

Parameters:

producer - a string describing the producer

Method Detail

call

public scala.Tuple2<String,byte[]> call(String t)
                                 throws Exception

Specified by:

call in interface org.apache.spark.api.java.function.PairFunction<String,String,byte[]>

Throws:

Exception