Package demo

Class ChainAligner

  • public class ChainAligner
extends java.lang.Object
    Demo code of clustering C-alpha chains.
    Author:
    Anthony Bradley

    • Constructor Summary

      Constructors 
      Constructor Description
      ChainAligner()  

    • Method Summary

      All Methods Static Methods Concrete Methods 
      Modifier and Type Method Description
      static void main​(java.lang.String[] args)
      Cluster the C-alpha chains of a set of PDB ids.

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • ChainAligner

        public ChainAligner()

    • Method Detail

      • main

        public static void main​(java.lang.String[] args)
                 throws java.io.IOException
        Cluster the C-alpha chains of a set of PDB ids.
        Parameters:
        args - the input args - currently none taken
        Throws:
        java.io.IOException - an error reading from the URL or the seqeunce file