CalculateFrequency (biojava-spark 0.3.0 API)

java.lang.Object
- org.biojava.spark.mappers.CalculateFrequency

All Implemented Interfaces:

java.io.Serializable, org.apache.spark.api.java.function.FlatMapFunction<scala.Tuple2<java.lang.String,org.rcsb.mmtf.api.StructureDataInterface>,org.biojava.nbio.structure.Atom>
```
public class CalculateFrequency
extends java.lang.Object
implements org.apache.spark.api.java.function.FlatMapFunction<scala.Tuple2<java.lang.String,org.rcsb.mmtf.api.StructureDataInterface>,org.biojava.nbio.structure.Atom>
```
A class to calculate the frequency of a given atom defined in a AtomSelectObject object.

Author:

Anthony Bradley

See Also:

Serialized Form

Constructor Summary

Constructors
Constructor Description

CalculateFrequency(org.rcsb.mmtf.spark.data.AtomSelectObject selectObject)
Constructor for the CalculateFrequency class.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`java.util.Iterator<org.biojava.nbio.structure.Atom>`	`call(scala.Tuple2<java.lang.String,org.rcsb.mmtf.api.StructureDataInterface> t)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - CalculateFrequency
```
public CalculateFrequency(org.rcsb.mmtf.spark.data.AtomSelectObject selectObject)
```
    Constructor for the CalculateFrequency class.
    
    Parameters:
    
    selectObject - the atoms to be elected
- Method Detail
  - call
```
public java.util.Iterator<org.biojava.nbio.structure.Atom> call(scala.Tuple2<java.lang.String,org.rcsb.mmtf.api.StructureDataInterface> t)
                                                         throws java.lang.Exception
```
    Specified by:
    
    call in interface org.apache.spark.api.java.function.FlatMapFunction<scala.Tuple2<java.lang.String,org.rcsb.mmtf.api.StructureDataInterface>,org.biojava.nbio.structure.Atom>
    
    Throws:
    
    java.lang.Exception