Package org.biojava.nbio.structure.align.gui

Class StructureAlignmentDisplay

java.lang.Object

org.biojava.nbio.structure.align.gui.StructureAlignmentDisplay

public class StructureAlignmentDisplay
extends Object

Constructor Summary

Constructors

Constructor	Description
StructureAlignmentDisplay()

Method Summary

Modifier and Type	Method	Description
static StructureAlignmentJmol	display(org.biojava.nbio.structure.align.model.AFPChain afpChain, org.biojava.nbio.structure.Atom[] ca1, org.biojava.nbio.structure.Atom[] ca2)	Display an AFPChain alignment

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

StructureAlignmentDisplay

public StructureAlignmentDisplay()

Method Detail

display

public static StructureAlignmentJmol display(org.biojava.nbio.structure.align.model.AFPChain afpChain,
                                             org.biojava.nbio.structure.Atom[] ca1,
                                             org.biojava.nbio.structure.Atom[] ca2)
                                      throws org.biojava.nbio.structure.StructureException

Display an AFPChain alignment

Parameters:

afpChain -

ca1 -

ca2 -

Returns:

a StructureAlignmentJmol instance

Throws:

org.biojava.nbio.structure.StructureException