org.biojava.nbio.structure.domain

Class RemotePDPProvider

java.lang.Object

org.biojava.nbio.structure.domain.SerializableCache<String,SortedSet<String>>

org.biojava.nbio.structure.domain.RemotePDPProvider

All Implemented Interfaces:

PDPProvider

public class RemotePDPProvider
extends SerializableCache<String,SortedSet<String>>
implements PDPProvider

A class that provided PDP assignments that are loaded from a remote web server

Author:

Andreas Prlic

Field Summary

Fields

Modifier and Type	Field and Description
static String	DEFAULT_SERVER

Fields inherited from class org.biojava.nbio.structure.domain.SerializableCache

cacheFileName, serializedCache

Constructor Summary

Constructors

Constructor and Description
RemotePDPProvider()
RemotePDPProvider(boolean useCache)

Method Summary

Methods

Modifier and Type	Method and Description
Structure	getDomain(String pdpDomainName, AtomCache cache)
SortedSet<String>	getPDPDomainNamesForPDB(String pdbId)
String	getServer()
static void	main(String[] args)
void	setServer(String server)

Methods inherited from class org.biojava.nbio.structure.domain.SerializableCache

cache, disableCache, enableCache, flushCache, get, isCacheEnabled, reloadFromFile

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

DEFAULT_SERVER

public static final String DEFAULT_SERVER

See Also:

Constant Field Values

Constructor Detail

RemotePDPProvider

public RemotePDPProvider()

RemotePDPProvider

public RemotePDPProvider(boolean useCache)

Method Detail

main

public static void main(String[] args)

getServer

public String getServer()

setServer

public void setServer(String server)

getDomain

public Structure getDomain(String pdpDomainName,
                  AtomCache cache)

Specified by:

getDomain in interface PDPProvider

getPDPDomainNamesForPDB

public SortedSet<String> getPDPDomainNamesForPDB(String pdbId)

Specified by:

getPDPDomainNamesForPDB in interface PDPProvider