Uses of Interface
org.biojava.nbio.structure.align.multiple.Block

Packages that use Block

Package	Description
org.biojava.nbio.structure.align.multiple

Uses of Block in org.biojava.nbio.structure.align.multiple

Classes in org.biojava.nbio.structure.align.multiple that implement Block

Modifier and Type	Class and Description
class	BlockImpl General implementation of a Block that supports alignments with gaps.

Methods in org.biojava.nbio.structure.align.multiple that return Block

Modifier and Type	Method and Description
Block	BlockImpl.clone()
Block	Block.clone() Creates and returns an identical copy of this block.

Methods in org.biojava.nbio.structure.align.multiple that return types with arguments of type Block

Modifier and Type	Method and Description
List<Block>	MultipleAlignmentImpl.getBlocks()
List<Block>	BlockSetImpl.getBlocks()
List<Block>	BlockSet.getBlocks() Returns the List of alignment Blocks of the BlockSet.
List<Block>	MultipleAlignment.getBlocks() Convenience method to get a list of all blocks from all blocksets

Method parameters in org.biojava.nbio.structure.align.multiple with type arguments of type Block

Modifier and Type	Method and Description
void	BlockSetImpl.setBlocks(List<Block> blocks)
void	BlockSet.setBlocks(List<Block> blocks) Set the List of alignment Blocks of the BlockSet.