org.biojava.nbio.structure.symmetry.internal

Interface OrderDetector

All Known Implementing Classes:

AngleOrderDetectorPlus, GraphComponentOrderDetector, SequenceFunctionOrderDetector

public interface OrderDetector

A method to decide the order of symmetry (number of subunits) given a structure self-alignment, calculated by CE-Symm.

Since:

4.2.0

Author:

dmyersturnbull

Method Summary

Methods

Modifier and Type	Method and Description
int	calculateOrder(AFPChain afpChain, Atom[] ca)

Method Detail

calculateOrder

int calculateOrder(AFPChain afpChain,
                 Atom[] ca)
                   throws RefinerFailedException

Throws:

RefinerFailedException