Uses of Interface
org.biojava.nbio.structure.cath.CathDatabase

Packages that use CathDatabase

Package	Description
org.biojava.nbio.structure.align.util
org.biojava.nbio.structure.cath

Uses of CathDatabase in org.biojava.nbio.structure.align.util

Methods in org.biojava.nbio.structure.align.util with parameters of type CathDatabase

Modifier and Type	Method and Description
Structure	AtomCache.getStructureForCathDomain(StructureName structureName, CathDatabase cathInstall) Returns a Structure corresponding to the CATH identifier supplied in structureName, using the specified CathDatabase.

Uses of CathDatabase in org.biojava.nbio.structure.cath

Classes in org.biojava.nbio.structure.cath that implement CathDatabase

Modifier and Type	Class and Description
class	CathInstallation

Methods in org.biojava.nbio.structure.cath that return CathDatabase

Modifier and Type	Method and Description
static CathDatabase	CathFactory.getCathDatabase() Returns the default (singleton) CathDatabase.
static CathDatabase	CathFactory.getCathDatabase(String version) Returns a CATH database of the specified version.

Methods in org.biojava.nbio.structure.cath with parameters of type CathDatabase

Modifier and Type	Method and Description
static void	CathFactory.setCath(CathDatabase cath) Sets the default (singleton) CathDatabase.