org.biojava.nbio.structure.io.util

Class PDBTemporaryStorageUtils.LinkRecord

java.lang.Object

org.biojava.nbio.structure.io.util.PDBTemporaryStorageUtils.LinkRecord

Enclosing class:

PDBTemporaryStorageUtils

public static class PDBTemporaryStorageUtils.LinkRecord
extends Object

Temporary data storage for LINK records. This is necessary because LINK records precede the atoms they correspond to in a PDB file, so we must store the information encoded in a LINK record until we actually know about the atoms a LINK refers to.

Author:

Ulysse Carion

Constructor Summary

Constructors

Constructor and Description
PDBTemporaryStorageUtils.LinkRecord(String name1, String altLoc1, String resName1, String chainID1, String resSeq1, String iCode1, String name2, String altLoc2, String resName2, String chainID2, String resSeq2, String iCode2, String sym1, String sym2)

Method Summary

Methods

Modifier and Type	Method and Description
String	getAltLoc1()
String	getAltLoc2()
String	getChainID1()
String	getChainID2()
String	getiCode1()
String	getiCode2()
String	getName1()
String	getName2()
String	getResName1()
String	getResName2()
String	getResSeq1()
String	getResSeq2()
String	getSym1()
String	getSym2()
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

PDBTemporaryStorageUtils.LinkRecord

public PDBTemporaryStorageUtils.LinkRecord(String name1,
                                   String altLoc1,
                                   String resName1,
                                   String chainID1,
                                   String resSeq1,
                                   String iCode1,
                                   String name2,
                                   String altLoc2,
                                   String resName2,
                                   String chainID2,
                                   String resSeq2,
                                   String iCode2,
                                   String sym1,
                                   String sym2)

Method Detail

getName1

public String getName1()

getAltLoc1

public String getAltLoc1()

getResName1

public String getResName1()

getChainID1

public String getChainID1()

getResSeq1

public String getResSeq1()

getiCode1

public String getiCode1()

getName2

public String getName2()

getAltLoc2

public String getAltLoc2()

getResName2

public String getResName2()

getChainID2

public String getChainID2()

getResSeq2

public String getResSeq2()

getiCode2

public String getiCode2()

getSym1

public String getSym1()

getSym2

public String getSym2()

toString

public String toString()

Overrides:

toString in class Object