Package org.biojava.nbio.structure.validation

Class ModelledSubgroup

  • public class ModelledSubgroup
extends Object

    Java class for anonymous complex type.

    The following schema fragment specifies the expected content contained within this class. 

     <complexType>
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element ref="{}angle-outlier" maxOccurs="unbounded" minOccurs="0"/>
         <element ref="{}clash" maxOccurs="unbounded" minOccurs="0"/>
         <element ref="{}bond-outlier" maxOccurs="unbounded" minOccurs="0"/>
         <element ref="{}mog-angle-outlier" maxOccurs="unbounded" minOccurs="0"/>
         <choice>
           <element ref="{}symm-clash" maxOccurs="unbounded" minOccurs="0"/>
           <element ref="{}mog-bond-outlier" maxOccurs="unbounded" minOccurs="0"/>
         </choice>
       </sequence>
       <attribute name="NatomsEDS" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="altcode" use="required" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" />
       <attribute name="avgoccu" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="chain" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" />
       <attribute name="ent" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="flippable-sidechain" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="icode" use="required" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" />
       <attribute name="ligRSRZ" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="ligRSRnbrMean" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="ligRSRnbrStdev" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="ligRSRnumnbrs" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="model" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="mogul-ignore" type="{http://www.w3.org/2001/XMLSchema}NCName" />
       <attribute name="num-H-reduce" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="owab" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="phi" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="psi" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="rama" type="{http://www.w3.org/2001/XMLSchema}NCName" />
       <attribute name="resname" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" />
       <attribute name="resnum" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
       <attribute name="rota" type="{http://www.w3.org/2001/XMLSchema}anySimpleType" />
       <attribute name="rscc" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="rsr" use="required" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="rsrz" type="{http://www.w3.org/2001/XMLSchema}decimal" />
       <attribute name="said" use="required" type="{http://www.w3.org/2001/XMLSchema}NCName" />
       <attribute name="seq" use="required" type="{http://www.w3.org/2001/XMLSchema}NMTOKEN" />
     </restriction>
   </complexContent>
 </complexType>

    • Constructor Detail

      • ModelledSubgroup

        public ModelledSubgroup()

    • Method Detail

      • getAngleOutlier

        public List<AngleOutlier> getAngleOutlier()
        Gets the value of the angleOutlier property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the angleOutlier property.

        For example, to add a new item, do as follows: 

            getAngleOutlier().add(newItem);

        Objects of the following type(s) are allowed in the list AngleOutlier

      • getClash

        public List<Clash> getClash()
        Gets the value of the clash property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the clash property.

        For example, to add a new item, do as follows: 

            getClash().add(newItem);

        Objects of the following type(s) are allowed in the list Clash

      • getBondOutlier

        public List<BondOutlier> getBondOutlier()
        Gets the value of the bondOutlier property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the bondOutlier property.

        For example, to add a new item, do as follows: 

            getBondOutlier().add(newItem);

        Objects of the following type(s) are allowed in the list BondOutlier

      • getMogAngleOutlier

        public List<MogAngleOutlier> getMogAngleOutlier()
        Gets the value of the mogAngleOutlier property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the mogAngleOutlier property.

        For example, to add a new item, do as follows: 

            getMogAngleOutlier().add(newItem);

        Objects of the following type(s) are allowed in the list MogAngleOutlier

      • getSymmClash

        public List<SymmClash> getSymmClash()
        Gets the value of the symmClash property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the symmClash property.

        For example, to add a new item, do as follows: 

            getSymmClash().add(newItem);

        Objects of the following type(s) are allowed in the list SymmClash

      • getMogBondOutlier

        public List<MogBondOutlier> getMogBondOutlier()
        Gets the value of the mogBondOutlier property.

        This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the mogBondOutlier property.

        For example, to add a new item, do as follows: 

            getMogBondOutlier().add(newItem);

        Objects of the following type(s) are allowed in the list MogBondOutlier

      • getNatomsEDS

        public BigInteger getNatomsEDS()
        Gets the value of the natomsEDS property.
        Returns:
        possible object is BigInteger

      • setNatomsEDS

        public void setNatomsEDS​(BigInteger value)
        Sets the value of the natomsEDS property.
        Parameters:
        value - allowed object is BigInteger

      • getAltcode

        public String getAltcode()
        Gets the value of the altcode property.
        Returns:
        possible object is String

      • setAltcode

        public void setAltcode​(String value)
        Sets the value of the altcode property.
        Parameters:
        value - allowed object is String

      • getAvgoccu

        public BigDecimal getAvgoccu()
        Gets the value of the avgoccu property.
        Returns:
        possible object is BigDecimal

      • setAvgoccu

        public void setAvgoccu​(BigDecimal value)
        Sets the value of the avgoccu property.
        Parameters:
        value - allowed object is BigDecimal

      • getChain

        public String getChain()
        Gets the value of the chain property.
        Returns:
        possible object is String

      • setChain

        public void setChain​(String value)
        Sets the value of the chain property.
        Parameters:
        value - allowed object is String

      • getEnt

        public BigInteger getEnt()
        Gets the value of the ent property.
        Returns:
        possible object is BigInteger

      • setEnt

        public void setEnt​(BigInteger value)
        Sets the value of the ent property.
        Parameters:
        value - allowed object is BigInteger

      • getFlippableSidechain

        public BigInteger getFlippableSidechain()
        Gets the value of the flippableSidechain property.
        Returns:
        possible object is BigInteger

      • setFlippableSidechain

        public void setFlippableSidechain​(BigInteger value)
        Sets the value of the flippableSidechain property.
        Parameters:
        value - allowed object is BigInteger

      • getIcode

        public String getIcode()
        Gets the value of the icode property.
        Returns:
        possible object is String

      • setIcode

        public void setIcode​(String value)
        Sets the value of the icode property.
        Parameters:
        value - allowed object is String

      • getLigRSRZ

        public BigDecimal getLigRSRZ()
        Gets the value of the ligRSRZ property.
        Returns:
        possible object is BigDecimal

      • setLigRSRZ

        public void setLigRSRZ​(BigDecimal value)
        Sets the value of the ligRSRZ property.
        Parameters:
        value - allowed object is BigDecimal

      • getLigRSRnbrMean

        public BigDecimal getLigRSRnbrMean()
        Gets the value of the ligRSRnbrMean property.
        Returns:
        possible object is BigDecimal

      • setLigRSRnbrMean

        public void setLigRSRnbrMean​(BigDecimal value)
        Sets the value of the ligRSRnbrMean property.
        Parameters:
        value - allowed object is BigDecimal

      • getLigRSRnbrStdev

        public BigDecimal getLigRSRnbrStdev()
        Gets the value of the ligRSRnbrStdev property.
        Returns:
        possible object is BigDecimal

      • setLigRSRnbrStdev

        public void setLigRSRnbrStdev​(BigDecimal value)
        Sets the value of the ligRSRnbrStdev property.
        Parameters:
        value - allowed object is BigDecimal

      • getLigRSRnumnbrs

        public BigInteger getLigRSRnumnbrs()
        Gets the value of the ligRSRnumnbrs property.
        Returns:
        possible object is BigInteger

      • setLigRSRnumnbrs

        public void setLigRSRnumnbrs​(BigInteger value)
        Sets the value of the ligRSRnumnbrs property.
        Parameters:
        value - allowed object is BigInteger

      • getModel

        public BigInteger getModel()
        Gets the value of the model property.
        Returns:
        possible object is BigInteger

      • setModel

        public void setModel​(BigInteger value)
        Sets the value of the model property.
        Parameters:
        value - allowed object is BigInteger

      • getMogulIgnore

        public String getMogulIgnore()
        Gets the value of the mogulIgnore property.
        Returns:
        possible object is String

      • setMogulIgnore

        public void setMogulIgnore​(String value)
        Sets the value of the mogulIgnore property.
        Parameters:
        value - allowed object is String

      • getNumHReduce

        public BigInteger getNumHReduce()
        Gets the value of the numHReduce property.
        Returns:
        possible object is BigInteger

      • setNumHReduce

        public void setNumHReduce​(BigInteger value)
        Sets the value of the numHReduce property.
        Parameters:
        value - allowed object is BigInteger

      • getOwab

        public BigDecimal getOwab()
        Gets the value of the owab property.
        Returns:
        possible object is BigDecimal

      • setOwab

        public void setOwab​(BigDecimal value)
        Sets the value of the owab property.
        Parameters:
        value - allowed object is BigDecimal

      • getPhi

        public BigDecimal getPhi()
        Gets the value of the phi property.
        Returns:
        possible object is BigDecimal

      • setPhi

        public void setPhi​(BigDecimal value)
        Sets the value of the phi property.
        Parameters:
        value - allowed object is BigDecimal

      • getPsi

        public BigDecimal getPsi()
        Gets the value of the psi property.
        Returns:
        possible object is BigDecimal

      • setPsi

        public void setPsi​(BigDecimal value)
        Sets the value of the psi property.
        Parameters:
        value - allowed object is BigDecimal

      • getRama

        public String getRama()
        Gets the value of the rama property.
        Returns:
        possible object is String

      • setRama

        public void setRama​(String value)
        Sets the value of the rama property.
        Parameters:
        value - allowed object is String

      • getResname

        public String getResname()
        Gets the value of the resname property.
        Returns:
        possible object is String

      • setResname

        public void setResname​(String value)
        Sets the value of the resname property.
        Parameters:
        value - allowed object is String

      • getResnum

        public BigInteger getResnum()
        Gets the value of the resnum property.
        Returns:
        possible object is BigInteger

      • setResnum

        public void setResnum​(BigInteger value)
        Sets the value of the resnum property.
        Parameters:
        value - allowed object is BigInteger

      • getRota

        public String getRota()
        Gets the value of the rota property.
        Returns:
        possible object is String

      • setRota

        public void setRota​(String value)
        Sets the value of the rota property.
        Parameters:
        value - allowed object is String

      • getRscc

        public BigDecimal getRscc()
        Gets the value of the rscc property.
        Returns:
        possible object is BigDecimal

      • setRscc

        public void setRscc​(BigDecimal value)
        Sets the value of the rscc property.
        Parameters:
        value - allowed object is BigDecimal

      • getRsr

        public BigDecimal getRsr()
        Gets the value of the rsr property.
        Returns:
        possible object is BigDecimal

      • setRsr

        public void setRsr​(BigDecimal value)
        Sets the value of the rsr property.
        Parameters:
        value - allowed object is BigDecimal

      • getRsrz

        public BigDecimal getRsrz()
        Gets the value of the rsrz property.
        Returns:
        possible object is BigDecimal

      • setRsrz

        public void setRsrz​(BigDecimal value)
        Sets the value of the rsrz property.
        Parameters:
        value - allowed object is BigDecimal

      • getSaid

        public String getSaid()
        Gets the value of the said property.
        Returns:
        possible object is String

      • setSaid

        public void setSaid​(String value)
        Sets the value of the said property.
        Parameters:
        value - allowed object is String

      • getSeq

        public String getSeq()
        Gets the value of the seq property.
        Returns:
        possible object is String

      • setSeq

        public void setSeq​(String value)
        Sets the value of the seq property.
        Parameters:
        value - allowed object is String