org.biojava.nbio.structure.align

Class FarmJob

java.lang.Object

org.biojava.nbio.structure.align.FarmJob

All Implemented Interfaces:

java.lang.Runnable

public class FarmJob
extends java.lang.Object
implements java.lang.Runnable

A job as it can be run on the farm.

Author:

Andreas Prlic for arguments see the printHelp() method.

Constructor Summary

Constructors

Constructor and Description
FarmJob()

Method Summary

Modifier and Type	Method and Description
void	addAlignmentProgressListener(AlignmentProgressListener listener)
void	clearListeners()
FarmJobParameters	getParams()
static void	main(java.lang.String[] argv)
void	printHelp()
void	run()
void	setParams(FarmJobParameters params)
void	terminate()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FarmJob

public FarmJob()

Method Detail

getParams

public FarmJobParameters getParams()

setParams

public void setParams(FarmJobParameters params)

addAlignmentProgressListener

public void addAlignmentProgressListener(AlignmentProgressListener listener)

clearListeners

public void clearListeners()

main

public static void main(java.lang.String[] argv)

run

public void run()

Specified by:

run in interface java.lang.Runnable

terminate

public void terminate()

printHelp

public void printHelp()