org.biojava.nbio.structure.io.sifts

Class SiftsMappingProvider

java.lang.Object

org.biojava.nbio.structure.io.sifts.SiftsMappingProvider

public class SiftsMappingProvider
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
SiftsMappingProvider()

Method Summary

Modifier and Type	Method and Description
static java.util.List<SiftsEntity>	getSiftsMapping(java.lang.String pdbId) Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL
static void	setFileLocation(java.lang.String myFileLocation)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SiftsMappingProvider

public SiftsMappingProvider()

Method Detail

setFileLocation

public static void setFileLocation(java.lang.String myFileLocation)

getSiftsMapping

public static java.util.List<SiftsEntity> getSiftsMapping(java.lang.String pdbId)
                                                   throws java.io.IOException

Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL

Parameters:

pdbId - the pdb identifier

Returns:

Throws:

java.io.IOException - if problems downloading or parsing the file