Serialized Form

Package org.biojava.nbio.survival.cox.comparators

Class org.biojava.nbio.survival.cox.comparators.CoxVariablesOverallModelFitComparator

class CoxVariablesOverallModelFitComparator extends Object implements Serializable

serialVersionUID:

1L

Serialized Fields

variables

String variables

Class org.biojava.nbio.survival.cox.comparators.MeanModelComparator

class MeanModelComparator extends Object implements Serializable

serialVersionUID:

1L

Serialized Fields

variable

String variable

Class org.biojava.nbio.survival.cox.comparators.SurvivalInfoComparator

class SurvivalInfoComparator extends Object implements Serializable

serialVersionUID:

1L

Class org.biojava.nbio.survival.cox.comparators.SurvivalInfoValueComparator

class SurvivalInfoValueComparator extends Object implements Serializable

serialVersionUID:

1L

Serialized Fields

variable

String variable

Package org.biojava.nbio.survival.data

Class org.biojava.nbio.survival.data.CompactCharSequence

class CompactCharSequence extends Object implements Serializable

serialVersionUID:

1L

Serialized Fields

data

byte[] data

end

int end

nullstring

boolean nullstring

offset

int offset

Package org.biojava.nbio.survival.kaplanmeier.figure

Class org.biojava.nbio.survival.kaplanmeier.figure.ExpressionFigure

class ExpressionFigure extends JPanel implements Serializable

serialVersionUID:

1L

Serialized Fields

bottom

int bottom

df

DecimalFormat df

fileName

String fileName

fm

FontMetrics fm

kmfi

KMFigureInfo kmfi

labelWidth

int labelWidth

left

int left

lineInfoList

ArrayList<String> lineInfoList

maxTime

Double maxTime

maxX

Double maxX

maxY

Double maxY

mean

Double mean

minX

Double minX

minY

Double minY

right

int right

siList

ArrayList<SurvivalInfo> siList

title

ArrayList<String> title

titleHeight

int titleHeight

top

int top

variable

String variable

xAxisLabelHeight

int xAxisLabelHeight

Class org.biojava.nbio.survival.kaplanmeier.figure.KaplanMeierFigure

class KaplanMeierFigure extends JPanel implements Serializable

serialVersionUID:

1L

Serialized Fields

adjustedPercentIncrement

Double adjustedPercentIncrement

bottom

int bottom

df

DecimalFormat df

fileName

String fileName

fm

FontMetrics fm

kmfi

KMFigureInfo kmfi

labelWidth

int labelWidth

left

int left

lineInfoList

ArrayList<String> lineInfoList

maxPercentage

double maxPercentage

maxTime

double maxTime

minPercentage

double minPercentage

minTime

double minTime

right

int right

sfi

SurvFitInfo sfi

survivalData

LinkedHashMap<String,ArrayList<CensorStatus>> survivalData

title

ArrayList<String> title

titleHeight

int titleHeight

top

int top

xAxisLabelHeight

int xAxisLabelHeight

xAxisTimeCoordinates

ArrayList<Integer> xAxisTimeCoordinates

xAxisTimeValues

ArrayList<Double> xAxisTimeValues

yaxisLabel

int yaxisLabel

Class org.biojava.nbio.survival.kaplanmeier.figure.NumbersAtRiskPanel

class NumbersAtRiskPanel extends JPanel implements Serializable

serialVersionUID:

1L

Serialized Fields

kmf

KaplanMeierFigure kmf

timePercentage

Double timePercentage