org.biojava3.core.sequence.compound
Class AmbiguityRNACompoundSet

java.lang.Object
  org.biojava3.core.sequence.template.AbstractCompoundSet<C>
      org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet<NucleotideCompound>
          org.biojava3.core.sequence.compound.RNACompoundSet
              org.biojava3.core.sequence.compound.AmbiguityRNACompoundSet

All Implemented Interfaces:

CompoundSet<NucleotideCompound>

public class AmbiguityRNACompoundSet
extends RNACompoundSet

Author:

Andy Yates

Constructor Summary

AmbiguityRNACompoundSet()

Method Summary

static AmbiguityRNACompoundSet

getDNACompoundSet()

Methods inherited from class org.biojava3.core.sequence.compound.RNACompoundSet

getRNACompoundSet, newNucleotideCompound

Methods inherited from class org.biojava3.core.sequence.template.AbstractNucleotideCompoundSet

addNucleotideCompound, calculateIndirectAmbiguities, getAmbiguity, isComplementable

Methods inherited from class org.biojava3.core.sequence.template.AbstractCompoundSet

addCompound, addCompound, addCompound, addEquivalent, compoundsEqual, compoundsEquivalent, getAllCompounds, getCompoundForString, getEquivalentCompounds, getMaxSingleCompoundStringLength, getStringForCompound, hasCompound, isCompoundStringLengthEqual, verifySequence

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AmbiguityRNACompoundSet

public AmbiguityRNACompoundSet()

Method Detail

getDNACompoundSet

public static AmbiguityRNACompoundSet getDNACompoundSet()