Uses of Package
org.biojava3.core.sequence.features

Packages that use org.biojava3.core.sequence.features

org.biojava3.core.sequence.features
org.biojava3.core.sequence.loader
org.biojava3.core.sequence.template

Classes in org.biojava3.core.sequence.features used by org.biojava3.core.sequence.features

AbstractFeature
A feature is currently any descriptive item that can be associated with a sequence position(s) A feature has a type and a source which is currently a string to allow flexibility for the user Ideally well defined features should have a class to describe attributes of that feature

DBReferenceInfo
If you have a uniprot ID then it is possible to get a collection of other id(s) that the protein is known by.

FeatureInterface
Interface class to handle describing arbitrary features.

Classes in org.biojava3.core.sequence.features used by org.biojava3.core.sequence.loader

DatabaseReferenceInterface
If a SequenceProxyReader implements this interface then that external source has a list of cross reference id(s)

DBReferenceInfo
If you have a uniprot ID then it is possible to get a collection of other id(s) that the protein is known by.

FeaturesKeyWordInterface
Models the keywords that are annotated for a protein sequence at Uniprot.

Classes in org.biojava3.core.sequence.features used by org.biojava3.core.sequence.template

DatabaseReferenceInterface
If a SequenceProxyReader implements this interface then that external source has a list of cross reference id(s)

FeatureInterface
Interface class to handle describing arbitrary features.

FeaturesKeyWordInterface
Models the keywords that are annotated for a protein sequence at Uniprot.