org.biojava3.core.sequence.template
Class AbstractCompound

java.lang.Object
  org.biojava3.core.sequence.template.AbstractCompound

All Implemented Interfaces:

Compound

Direct Known Subclasses:

AminoAcidCompound, CodonCompound, NucleotideCompound

public abstract class AbstractCompound
extends Object
implements Compound

The details of a Compound

Author:

Andy Yates

Constructor Summary

AbstractCompound(String base)

Method Summary

String	getBase()
String	getDescription()
String	getLongName()
Float	getMolecularWeight()
String	getShortName()
String	getUpperedBase()
void	setDescription(String description)
void	setLongName(String longName)
void	setMolecularWeight(Float molecularWeight)
void	setShortName(String shortName)
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.biojava3.core.sequence.template.Compound

equalsIgnoreCase

Constructor Detail

AbstractCompound

public AbstractCompound(String base)

Method Detail

getBase

public String getBase()

getUpperedBase

public String getUpperedBase()

getDescription

public String getDescription()

Specified by:

getDescription in interface Compound

setDescription

public void setDescription(String description)

Specified by:

setDescription in interface Compound

getShortName

public String getShortName()

Specified by:

getShortName in interface Compound

setShortName

public void setShortName(String shortName)

Specified by:

setShortName in interface Compound

getLongName

public String getLongName()

Specified by:

getLongName in interface Compound

setLongName

public void setLongName(String longName)

Specified by:

setLongName in interface Compound

getMolecularWeight

public Float getMolecularWeight()

Specified by:

getMolecularWeight in interface Compound

setMolecularWeight

public void setMolecularWeight(Float molecularWeight)

Specified by:

setMolecularWeight in interface Compound

toString

public String toString()

Overrides:

toString in class Object