Uses of Class
org.biojava3.core.sequence.transcription.Table.Codon

Packages that use Table.Codon

org.biojava3.core.sequence.io
org.biojava3.core.sequence.transcription

Uses of Table.Codon in org.biojava3.core.sequence.io

Methods in org.biojava3.core.sequence.io that return types with arguments of type Table.Codon

CompoundSet<Table.Codon>	IUPACParser.IUPACTable.getCodonCompoundSet(CompoundSet<NucleotideCompound> rnaCompounds, CompoundSet<AminoAcidCompound> aminoAcidCompounds) Returns the compound set of codons
List<Table.Codon>	IUPACParser.IUPACTable.getCodons(CompoundSet<NucleotideCompound> nucelotides, CompoundSet<AminoAcidCompound> aminoAcids) Returns a list of codons where the source and target compounds are the same as those given by the parameters.

Uses of Table.Codon in org.biojava3.core.sequence.transcription

Methods in org.biojava3.core.sequence.transcription that return types with arguments of type Table.Codon

CompoundSet<Table.Codon>	Table.getCodonCompoundSet(CompoundSet<NucleotideCompound> rnaCompounds, CompoundSet<AminoAcidCompound> aminoAcidCompounds)
List<Table.Codon>	Table.getCodons(CompoundSet<NucleotideCompound> nucelotides, CompoundSet<AminoAcidCompound> aminoAcids)

Constructor parameters in org.biojava3.core.sequence.transcription with type arguments of type Table.Codon

RNAToAminoAcidTranslator(SequenceCreatorInterface<AminoAcidCompound> creator, CompoundSet<NucleotideCompound> nucleotides, CompoundSet<Table.Codon> codons, CompoundSet<AminoAcidCompound> aminoAcids, Table table, boolean trimStops, boolean initMetOnly, boolean translateNCodons)