001    /*
002     *                    BioJava development code
003     *
004     * This code may be freely distributed and modified under the
005     * terms of the GNU Lesser General Public Licence.  This should
006     * be distributed with the code.  If you do not have a copy,
007     * see:
008     *
009     *      http://www.gnu.org/copyleft/lesser.html
010     *
011     * Copyright for this code is held jointly by the individual
012     * authors.  These should be listed in @author doc comments.
013     *
014     * For more information on the BioJava project and its aims,
015     * or to join the biojava-l mailing list, visit the home page
016     * at:
017     *
018     *      http://www.biojava.org/
019     *
020     * Created on 01-21-2010
021     */
022    
023    package org.biojava3.core.sequence.location;
024    
025    import org.biojava3.core.sequence.template.AbstractSequence;
026    import org.biojava3.core.sequence.template.Compound;
027    
028    /**
029     * A location in a sequence that keeps a reference to its parent sequence
030     * @author Scooter Willis <willishf at gmail dot com>
031     */
032    public class SequenceLocation<S extends AbstractSequence<C>, C extends Compound> extends SimpleLocation {
033    private S sequence;
034        public SequenceLocation(int start, int end,S sequence){
035            super(start,end);
036            this.sequence = sequence;
037    
038        }
039    
040        /**
041         * @return the sequence
042         */
043        public S getSequence() {
044            return sequence;
045        }
046    
047    
048    }