Module org.scijava.ops.flim

Package org.scijava.ops.flim.impl

Class AbstractFitWorker<I extends RealType<I>>

java.lang.Object

org.scijava.ops.flim.impl.AbstractFitWorker<I>

All Implemented Interfaces:

FitWorker<I>

Direct Known Subclasses:

AbstractSingleFitWorker, GlobalFit.GlobalFitWorker

public abstract class AbstractFitWorker<I extends RealType<I>>
extends Object
implements FitWorker<I>

AbstractFitWorker

Nested Class Summary

Nested classes/interfaces inherited from interface org.scijava.ops.flim.FitWorker

FitWorker.FitEventHandler<I extends RealType<I>>

Field Summary

Fields

Modifier and Type	Field	Description
protected int	adjFitEnd	The adjusted FitParams.fitStart and FitParams.fitEnd taking into account leading instr prefix (see below)
protected int	adjFitStart	The adjusted FitParams.fitStart and FitParams.fitEnd taking into account leading instr prefix (see below)
protected int	nData	Should be self-explanatory
protected int	nDataTotal	The number of data copied (including instr prefix/suffix and the part to fit, see below)
protected int	nParam	Should be self-explanatory
protected FitParams<I>	params	The fit parameters for this worker
protected float	rawChisq_target	The raw chisq target (params.chisq is reduced by DOF)
protected FitResults	results	The fit results for this worker

Constructor Summary

Constructors

Constructor	Description
AbstractFitWorker(FitParams<I> params, FitResults results)

Method Summary

Modifier and Type	Method	Description
int	nDataOut()	How many bins will be fitted?
int	nParamOut()	How many parameters should there be in results.param? E.g.
void	populate()	The settings passed into the fit worker is mutable.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.scijava.ops.flim.FitWorker

fitBatch

Field Detail

params

protected final FitParams<I extends RealType<I>> params

The fit parameters for this worker

results

protected final FitResults results

The fit results for this worker

nData

protected final int nData

Should be self-explanatory

nParam

protected final int nParam

Should be self-explanatory

adjFitStart

protected int adjFitStart

The adjusted FitParams.fitStart and FitParams.fitEnd taking into account leading instr prefix (see below)

adjFitEnd

protected int adjFitEnd

The adjusted FitParams.fitStart and FitParams.fitEnd taking into account leading instr prefix (see below)

nDataTotal

protected int nDataTotal

The number of data copied (including instr prefix/suffix and the part to fit, see below)

rawChisq_target

protected float rawChisq_target

The raw chisq target (params.chisq is reduced by DOF)

Constructor Detail

AbstractFitWorker

public AbstractFitWorker(FitParams<I> params,
                         FitResults results)

Method Detail

populate

public void populate()

The settings passed into the fit worker is mutable. This method refreshes the fit worker by updating cached information and probably re-allocating buffers.

nParamOut

public int nParamOut()

Description copied from interface: FitWorker

How many parameters should there be in results.param? E.g. 3 for one-component LMAFit.LMAFitWorker and 5 for PhasorFit.PhasorFitWorker.

Specified by:

nParamOut in interface FitWorker<I extends RealType<I>>

Returns:

The number of output parameters in the parameter array.

nDataOut

public int nDataOut()

Description copied from interface: FitWorker

How many bins will be fitted?

Specified by:

nDataOut in interface FitWorker<I extends RealType<I>>

Returns:

fitEnd - fitStart