Module org.scijava.ops.image

Package org.scijava.ops.image.deconvolve

Class PadAndRichardsonLucy<I extends RealType<I> & NativeType<I>,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>

java.lang.Object

org.scijava.ops.image.deconvolve.PadAndRichardsonLucy<I,O,K,C>

Type Parameters:

I -

O -

K -

C -

All Implemented Interfaces:

Functions.Arity9<RandomAccessibleInterval<I>,RandomAccessibleInterval<K>,O,C,Integer,Boolean,Boolean,long[],OutOfBoundsFactory<I,RandomAccessibleInterval<I>>,RandomAccessibleInterval<O>>

public class PadAndRichardsonLucy<I extends RealType<I> & NativeType<I>,O extends RealType<O> & NativeType<O>,K extends RealType<K> & NativeType<K>,C extends ComplexType<C> & NativeType<C>>
extends Object
implements Functions.Arity9<RandomAccessibleInterval<I>,RandomAccessibleInterval<K>,O,C,Integer,Boolean,Boolean,long[],OutOfBoundsFactory<I,RandomAccessibleInterval<I>>,RandomAccessibleInterval<O>>

Richardson Lucy function op that operates on (@link RandomAccessibleInterval) (Lucy, L. B. (1974). "An iterative technique for the rectification of observed distributions".)

Author:

Brian Northan

Implementation Note:

op names='deconvolve.richardsonLucy', priority='100.'

Constructor Summary

Constructors

Constructor	Description
PadAndRichardsonLucy()

Method Summary

Modifier and Type	Method	Description
RandomAccessibleInterval<O>	apply(RandomAccessibleInterval<I> input, RandomAccessibleInterval<K> kernel, O outType, C complexType, Integer maxIterations, Boolean nonCirculant, Boolean accelerate, long[] borderSize, OutOfBoundsFactory<I,RandomAccessibleInterval<I>> obfInput)	TODO
protected Computers.Arity1<RandomAccessibleInterval<O>,RandomAccessibleInterval<O>>	getComputeEstimateOp()	set up and return the compute estimate op.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.scijava.function.Functions.Arity9

andThen

Constructor Detail

PadAndRichardsonLucy

public PadAndRichardsonLucy()

Method Detail

apply

public RandomAccessibleInterval<O> apply(RandomAccessibleInterval<I> input,
                                         RandomAccessibleInterval<K> kernel,
                                         O outType,
                                         C complexType,
                                         Integer maxIterations,
                                         Boolean nonCirculant,
                                         Boolean accelerate,
                                         long[] borderSize,
                                         OutOfBoundsFactory<I,RandomAccessibleInterval<I>> obfInput)

TODO

Specified by:

apply in interface Functions.Arity9<RandomAccessibleInterval<I extends RealType<I> & NativeType<I>>,RandomAccessibleInterval<K extends RealType<K> & NativeType<K>>,O extends RealType<O> & NativeType<O>,C extends ComplexType<C> & NativeType<C>,Integer,Boolean,Boolean,long[],OutOfBoundsFactory<I extends RealType<I> & NativeType<I>,RandomAccessibleInterval<I extends RealType<I> & NativeType<I>>>,RandomAccessibleInterval<O extends RealType<O> & NativeType<O>>>

Parameters:

input -

kernel -

outType -

complexType -

maxIterations - max number of iterations

nonCirculant - indicates whether to use non-circulant edge handling

accelerate - indicates whether or not to use acceleration

borderSize -

obfInput -

Returns:

the output

getComputeEstimateOp

protected Computers.Arity1<RandomAccessibleInterval<O>,RandomAccessibleInterval<O>> getComputeEstimateOp()

set up and return the compute estimate op. This function can be over-ridden to implement different types of richardson lucy (like total variation richardson lucy)

Returns:

compute estimate op