Module org.scijava.ops.image

Package org.scijava.ops.image.transform

Class Transforms<T,R extends RealType<R>,N extends NumericType<N>,Y extends Type<Y>,F extends RandomAccessibleInterval<T>,E extends EuclideanSpace>

java.lang.Object

org.scijava.ops.image.transform.Transforms<T,R,N,Y,F,E>

Type Parameters:

T - - a TypeVariable with no bounds.

R - - a TypeVariable extending RealType

N - - a TypeVariable extending NumericType

Y - - a TypeVariable extending Type

F - - a TypeVariable extending RandomAccessibleInterval of type T

E - - a TypeVariable extending EuclideanSpace

public class Transforms<T,R extends RealType<R>,N extends NumericType<N>,Y extends Type<Y>,F extends RandomAccessibleInterval<T>,E extends EuclideanSpace>
extends Object

OpCollection containing all of the transform Ops. TODO move these type variables into each Op?

Author:

Gabriel Selzer

Field Summary

Fields

Modifier and Type	Field	Description
Function<RandomAccessible<T>,MixedTransformView<T>>	addDimensionView
Functions.Arity3<RandomAccessibleInterval<T>,Long,Long,IntervalView<T>>	addDimensionViewMinMax
BiFunction<RandomAccessible<N>,Integer,CompositeView<N,NumericComposite<N>>>	collapseNumericViewRA
Function<RandomAccessibleInterval<N>,CompositeIntervalView<N,NumericComposite<N>>>	collapseNumericViewRAI
BiFunction<RandomAccessible<R>,Integer,CompositeView<R,RealComposite<R>>>	collapseRealViewRA
Function<RandomAccessibleInterval<R>,CompositeIntervalView<R,RealComposite<R>>>	collapseRealViewRAI
Function<RandomAccessible<T>,CompositeView<T,? extends GenericComposite<T>>>	collapseViewRA
Function<RandomAccessibleInterval<T>,CompositeIntervalView<T,? extends GenericComposite<T>>>	collapseViewRAI
BiFunction<Integer,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>>	concatenateArray
BiFunction<Integer,List<RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>>	concatenateList
Functions.Arity3<Integer,StackView.StackAccessMode,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>>	concatenateStackArray
Functions.Arity3<Integer,StackView.StackAccessMode,List<RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>>	concatenateStackList
Function<RandomAccessibleInterval<T>,RandomAccessibleInterval<T>>	dropSingletonDimensions
Function<F,ExtendedRandomAccessibleInterval<T,F>>	extendBorderView
Function<F,ExtendedRandomAccessibleInterval<T,F>>	extendMirrorDoubleView
Function<F,ExtendedRandomAccessibleInterval<T,F>>	extendMirrorSingleView
Function<F,ExtendedRandomAccessibleInterval<T,F>>	extendPeriodicView
Functions.Arity3<RandomAccessibleInterval<R>,Double,Double,ExtendedRandomAccessibleInterval<R,RandomAccessibleInterval<R>>>	extendRandomView
BiFunction<RandomAccessibleInterval<Y>,Y,ExtendedRandomAccessibleInterval<Y,RandomAccessibleInterval<Y>>>	extendValueView
BiFunction<F,OutOfBoundsFactory<T,? super F>,ExtendedRandomAccessibleInterval<T,F>>	extendView
Function<RandomAccessibleInterval<N>,ExtendedRandomAccessibleInterval<N,RandomAccessibleInterval<N>>>	extendZeroView
Function<RandomAccessibleInterval<T>,IterableInterval<T>>	flatIterableView
Functions.Arity3<RandomAccessible<T>,Integer,Long,MixedTransformView<T>>	hyperSliceRA
Functions.Arity3<RandomAccessibleInterval<T>,Integer,Long,IntervalView<T>>	hyperSliceRAI
BiFunction<RandomAccessible<T>,int[],RandomAccessible<? extends RandomAccessible<T>>>	hyperSlices
BiFunction<E,InterpolatorFactory<T,E>,RealRandomAccessible<T>>	interpolateView
Functions.Arity3<RandomAccessible<T>,long[],long[],IntervalView<T>>	intervalMinMax
BiFunction<RandomAccessible<T>,Interval,IntervalView<T>>	intervalWithInterval
BiFunction<RandomAccessible<T>,Integer,MixedTransformView<T>>	invertAxisRA
BiFunction<RandomAccessibleInterval<T>,Integer,IntervalView<T>>	invertAxisRAI
BiFunction<RandomAccessible<T>,Interval,IntervalView<T>>	offsetInterval
Functions.Arity3<RandomAccessible<T>,long[],long[],IntervalView<T>>	offsetIntervalMinMax
BiFunction<RandomAccessible<T>,long[],MixedTransformView<T>>	offsetRA
BiFunction<RandomAccessibleInterval<T>,long[],IntervalView<T>>	offsetRAI
BiFunction<RandomAccessibleInterval<T>,int[],IntervalView<T>>	permuteCoordinates
BiFunction<RandomAccessibleInterval<T>,int[],IntervalView<T>>	permuteCoordinatesInverse
Functions.Arity3<RandomAccessibleInterval<T>,int[],Integer,IntervalView<T>>	permuteCoordinatesInverseSingleDim
Functions.Arity3<RandomAccessibleInterval<T>,int[],Integer,IntervalView<T>>	permuteCoordinatesSingleDim
Functions.Arity3<RandomAccessible<T>,Integer,Integer,MixedTransformView<T>>	permuteRA
Functions.Arity3<RandomAccessibleInterval<T>,Integer,Integer,IntervalView<T>>	permuteRAI
Function<RealRandomAccessible<T>,RandomAccessibleOnRealRandomAccessible<T>>	rasterize
Functions.Arity3<RandomAccessible<T>,Integer,Integer,MixedTransformView<T>>	rotateRA
Functions.Arity3<RandomAccessibleInterval<T>,Integer,Integer,IntervalView<T>>	rotateRAI
Functions.Arity3<RandomAccessible<T>,Integer,Integer,TransformView<T>>	shear
Functions.Arity4<RandomAccessible<T>,Interval,Integer,Integer,IntervalView<T>>	shearInterval
BiFunction<StackView.StackAccessMode,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>>	stackAccessArray
BiFunction<StackView.StackAccessMode,List<? extends RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>>	stackAccessList
Function<RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>>	stackArray
Function<List<? extends RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>>	stackList
BiFunction<RandomAccessibleInterval<T>,long[],SubsampleIntervalView<T>>	subsampleRAINonuniform
BiFunction<RandomAccessibleInterval<T>,Long,SubsampleIntervalView<T>>	subsampleRAIUniform
BiFunction<RandomAccessible<T>,long[],SubsampleView<T>>	subsampleRANonuniform
BiFunction<RandomAccessible<T>,Long,SubsampleView<T>>	subsampleRAUniform
BiFunction<RandomAccessible<T>,long[],MixedTransformView<T>>	translateRA
BiFunction<RandomAccessibleInterval<T>,long[],IntervalView<T>>	translateRAI
Functions.Arity3<RandomAccessible<T>,Integer,Integer,TransformView<T>>	unshearRA
Functions.Arity4<RandomAccessible<T>,Interval,Integer,Integer,IntervalView<T>>	unshearRAI
Function<RandomAccessibleInterval<T>,IntervalView<T>>	zeroMinView

Constructor Summary

Constructors

Constructor	Description
Transforms()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

addDimensionView

public final Function<RandomAccessible<T>,MixedTransformView<T>> addDimensionView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.addDimensionView'

addDimensionViewMinMax

public final Functions.Arity3<RandomAccessibleInterval<T>,Long,Long,IntervalView<T>> addDimensionViewMinMax

Output parameters:

result

Input parameters:

input

min

max

Implementation Note:

op names='transform.addDimensionView'

collapseViewRA

public final Function<RandomAccessible<T>,CompositeView<T,? extends GenericComposite<T>>> collapseViewRA

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.collapseView', priority='-100.'

collapseViewRAI

public final Function<RandomAccessibleInterval<T>,CompositeIntervalView<T,? extends GenericComposite<T>>> collapseViewRAI

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.collapseView'

collapseRealViewRA

public final BiFunction<RandomAccessible<R extends RealType<R>>,Integer,CompositeView<R extends RealType<R>,RealComposite<R extends RealType<R>>>> collapseRealViewRA

Output parameters:

result

Input parameters:

input

numChannels

Implementation Note:

op names='transform.collapseRealView'

collapseRealViewRAI

public final Function<RandomAccessibleInterval<R extends RealType<R>>,CompositeIntervalView<R extends RealType<R>,RealComposite<R extends RealType<R>>>> collapseRealViewRAI

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.collapseRealView'

collapseNumericViewRA

public final BiFunction<RandomAccessible<N extends NumericType<N>>,Integer,CompositeView<N extends NumericType<N>,NumericComposite<N extends NumericType<N>>>> collapseNumericViewRA

Output parameters:

result

Input parameters:

input

numChannels

Implementation Note:

op names='transform.collapseNumericView'

collapseNumericViewRAI

public final Function<RandomAccessibleInterval<N extends NumericType<N>>,CompositeIntervalView<N extends NumericType<N>,NumericComposite<N extends NumericType<N>>>> collapseNumericViewRAI

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.collapseNumericView'

concatenateArray

public final BiFunction<Integer,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>> concatenateArray

Output parameters:

result

Input parameters:

concatenationAxis

inputs

Implementation Note:

op names='transform.concatenateView'

concatenateList

public final BiFunction<Integer,List<RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>> concatenateList

Output parameters:

result

Input parameters:

concatenationAxis

inputs

Implementation Note:

op names='transform.concatenateView'

concatenateStackArray

public final Functions.Arity3<Integer,StackView.StackAccessMode,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>> concatenateStackArray

Output parameters:

result

Input parameters:

concatenationAxis

stackAccess

inputs

Implementation Note:

op names='transform.concatenateView'

concatenateStackList

public final Functions.Arity3<Integer,StackView.StackAccessMode,List<RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>> concatenateStackList

Output parameters:

result

Input parameters:

concatenationAxis

stackAccess

inputs

Implementation Note:

op names='transform.concatenateView'

dropSingletonDimensions

public final Function<RandomAccessibleInterval<T>,RandomAccessibleInterval<T>> dropSingletonDimensions

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.dropSingletonDimensionsView'

extendView

public final BiFunction<F extends RandomAccessibleInterval<T>,OutOfBoundsFactory<T,? super F extends RandomAccessibleInterval<T>>,ExtendedRandomAccessibleInterval<T,F extends RandomAccessibleInterval<T>>> extendView

Output parameters:

result

Input parameters:

input

outofBoundsFactory

Implementation Note:

op names='transform.extendView'

extendBorderView

public final Function<F extends RandomAccessibleInterval<T>,ExtendedRandomAccessibleInterval<T,F extends RandomAccessibleInterval<T>>> extendBorderView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.extendBorderView'

extendMirrorDoubleView

public final Function<F extends RandomAccessibleInterval<T>,ExtendedRandomAccessibleInterval<T,F extends RandomAccessibleInterval<T>>> extendMirrorDoubleView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.extendMirrorDoubleView'

extendMirrorSingleView

public final Function<F extends RandomAccessibleInterval<T>,ExtendedRandomAccessibleInterval<T,F extends RandomAccessibleInterval<T>>> extendMirrorSingleView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.extendMirrorSingleView'

extendPeriodicView

public final Function<F extends RandomAccessibleInterval<T>,ExtendedRandomAccessibleInterval<T,F extends RandomAccessibleInterval<T>>> extendPeriodicView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.extendPeriodicView'

extendRandomView

public final Functions.Arity3<RandomAccessibleInterval<R extends RealType<R>>,Double,Double,ExtendedRandomAccessibleInterval<R extends RealType<R>,RandomAccessibleInterval<R extends RealType<R>>>> extendRandomView

Output parameters:

result

Input parameters:

input

min

max

Implementation Note:

op names='transform.extendRandomView'

extendValueView

public final BiFunction<RandomAccessibleInterval<Y extends Type<Y>>,Y extends Type<Y>,ExtendedRandomAccessibleInterval<Y extends Type<Y>,RandomAccessibleInterval<Y extends Type<Y>>>> extendValueView

Output parameters:

result

Input parameters:

input

value

Implementation Note:

op names='transform.extendValueView'

extendZeroView

public final Function<RandomAccessibleInterval<N extends NumericType<N>>,ExtendedRandomAccessibleInterval<N extends NumericType<N>,RandomAccessibleInterval<N extends NumericType<N>>>> extendZeroView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.extendZeroView'

flatIterableView

public final Function<RandomAccessibleInterval<T>,IterableInterval<T>> flatIterableView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.flatIterableView'

hyperSliceRA

public final Functions.Arity3<RandomAccessible<T>,Integer,Long,MixedTransformView<T>> hyperSliceRA

Output parameters:

result

Input parameters:

input

dimension

position

Implementation Note:

op names='transform.hyperSliceView', priority='-100.'

hyperSliceRAI

public final Functions.Arity3<RandomAccessibleInterval<T>,Integer,Long,IntervalView<T>> hyperSliceRAI

Output parameters:

result

Input parameters:

input

dimension

position

Implementation Note:

op names='transform.hyperSliceView'

hyperSlices

public final BiFunction<RandomAccessible<T>,int[],RandomAccessible<? extends RandomAccessible<T>>> hyperSlices

Output parameters:

result

Input parameters:

input

axes

Implementation Note:

op names='transform.hyperSlicesView'

interpolateView

public final BiFunction<E extends EuclideanSpace,InterpolatorFactory<T,E extends EuclideanSpace>,RealRandomAccessible<T>> interpolateView

Output parameters:

result

Input parameters:

input

interpolatorFactory

Implementation Note:

op names='transform.interpolateView'

intervalMinMax

public final Functions.Arity3<RandomAccessible<T>,long[],long[],IntervalView<T>> intervalMinMax

Output parameters:

result

Input parameters:

input

min

max

Implementation Note:

op names='transform.intervalView, transform.crop'

intervalWithInterval

public final BiFunction<RandomAccessible<T>,Interval,IntervalView<T>> intervalWithInterval

Output parameters:

result

Input parameters:

input

interval

Implementation Note:

op names='transform.intervalView, transform.crop'

invertAxisRA

public final BiFunction<RandomAccessible<T>,Integer,MixedTransformView<T>> invertAxisRA

Output parameters:

result

Input parameters:

input

dimension

Implementation Note:

op names='transform.invertAxisView', priority='-100.'

invertAxisRAI

public final BiFunction<RandomAccessibleInterval<T>,Integer,IntervalView<T>> invertAxisRAI

Output parameters:

result

Input parameters:

input

dimension

Implementation Note:

op names='transform.invertAxisView'

offsetRA

public final BiFunction<RandomAccessible<T>,long[],MixedTransformView<T>> offsetRA

Output parameters:

result

Input parameters:

input

offset

Implementation Note:

op names='transform.offsetView', priority='-100.'

offsetRAI

public final BiFunction<RandomAccessibleInterval<T>,long[],IntervalView<T>> offsetRAI

Output parameters:

result

Input parameters:

input

offset

Implementation Note:

op names='transform.offsetView'

offsetIntervalMinMax

public final Functions.Arity3<RandomAccessible<T>,long[],long[],IntervalView<T>> offsetIntervalMinMax

Output parameters:

result

Input parameters:

input

intervalMin

intervalMax

Implementation Note:

op names='transform.offsetView'

offsetInterval

public final BiFunction<RandomAccessible<T>,Interval,IntervalView<T>> offsetInterval

Output parameters:

result

Input parameters:

input

interval

Implementation Note:

op names='transform.offsetView'

permuteRA

public final Functions.Arity3<RandomAccessible<T>,Integer,Integer,MixedTransformView<T>> permuteRA

Output parameters:

result

Input parameters:

input

fromAxis

toAxis

Implementation Note:

op names='transform.permuteView', priority='-100.'

permuteRAI

public final Functions.Arity3<RandomAccessibleInterval<T>,Integer,Integer,IntervalView<T>> permuteRAI

Output parameters:

result

Input parameters:

input

fromAxis

toAxis

Implementation Note:

op names='transform.permuteView'

permuteCoordinatesInverse

public final BiFunction<RandomAccessibleInterval<T>,int[],IntervalView<T>> permuteCoordinatesInverse

Output parameters:

result

Input parameters:

input

permutation

Implementation Note:

op names='transform.permuteCoordinatesInverseView'

permuteCoordinatesInverseSingleDim

public final Functions.Arity3<RandomAccessibleInterval<T>,int[],Integer,IntervalView<T>> permuteCoordinatesInverseSingleDim

Output parameters:

result

Input parameters:

input

permutation

dimension

Implementation Note:

op names='transform.permuteCoordinatesInverseView'

permuteCoordinates

public final BiFunction<RandomAccessibleInterval<T>,int[],IntervalView<T>> permuteCoordinates

Output parameters:

result

Input parameters:

input

permutation

Implementation Note:

op names='transform.permuteCoordinatesView'

permuteCoordinatesSingleDim

public final Functions.Arity3<RandomAccessibleInterval<T>,int[],Integer,IntervalView<T>> permuteCoordinatesSingleDim

Output parameters:

result

Input parameters:

input

permutation

dimension

Implementation Note:

op names='transform.permuteCoordinatesView'

rasterize

public final Function<RealRandomAccessible<T>,RandomAccessibleOnRealRandomAccessible<T>> rasterize

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.rasterView'

rotateRA

public final Functions.Arity3<RandomAccessible<T>,Integer,Integer,MixedTransformView<T>> rotateRA

Output parameters:

result

Input parameters:

input

fromAxis

toAxis

Implementation Note:

op names='transform.rotateView', priority='-100.'

rotateRAI

public final Functions.Arity3<RandomAccessibleInterval<T>,Integer,Integer,IntervalView<T>> rotateRAI

Output parameters:

result

Input parameters:

input

fromAxis

toAxis

Implementation Note:

op names='transform.rotateView'

shear

public final Functions.Arity3<RandomAccessible<T>,Integer,Integer,TransformView<T>> shear

Output parameters:

result

Input parameters:

input

shearDimension

refDimension

Implementation Note:

op names='transform.shearView'

shearInterval

public final Functions.Arity4<RandomAccessible<T>,Interval,Integer,Integer,IntervalView<T>> shearInterval

Output parameters:

result

Input parameters:

input

interval

shearDimension

refDimension

Implementation Note:

op names='transform.shearView'

stackList

public final Function<List<? extends RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>> stackList

Output parameters:

result

Input parameters:

inputs

Implementation Note:

op names='transform.stackView'

stackArray

public final Function<RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>> stackArray

Output parameters:

result

Input parameters:

inputs

Implementation Note:

op names='transform.stackView'

stackAccessList

public final BiFunction<StackView.StackAccessMode,List<? extends RandomAccessibleInterval<T>>,RandomAccessibleInterval<T>> stackAccessList

Output parameters:

result

Input parameters:

stackAccessMode

inputs

Implementation Note:

op names='transform.stackView'

stackAccessArray

public final BiFunction<StackView.StackAccessMode,RandomAccessibleInterval<T>[],RandomAccessibleInterval<T>> stackAccessArray

Output parameters:

result

Input parameters:

stackAccessMode

inputs

Implementation Note:

op names='transform.stackView'

subsampleRAUniform

public final BiFunction<RandomAccessible<T>,Long,SubsampleView<T>> subsampleRAUniform

Output parameters:

result

Input parameters:

input

step

Implementation Note:

op names='transform.subsampleView', priority='-100.'

subsampleRANonuniform

public final BiFunction<RandomAccessible<T>,long[],SubsampleView<T>> subsampleRANonuniform

Output parameters:

result

Input parameters:

input

steps

Implementation Note:

op names='transform.subsampleView', priority='-100.'

subsampleRAIUniform

public final BiFunction<RandomAccessibleInterval<T>,Long,SubsampleIntervalView<T>> subsampleRAIUniform

Output parameters:

result

Input parameters:

input

step

Implementation Note:

op names='transform.subsampleView'

subsampleRAINonuniform

public final BiFunction<RandomAccessibleInterval<T>,long[],SubsampleIntervalView<T>> subsampleRAINonuniform

Output parameters:

result

Input parameters:

input

steps

Implementation Note:

op names='transform.subsampleView'

translateRA

public final BiFunction<RandomAccessible<T>,long[],MixedTransformView<T>> translateRA

Output parameters:

result

Input parameters:

input

steps

Implementation Note:

op names='transform.translateView', priority='-100.'

translateRAI

public final BiFunction<RandomAccessibleInterval<T>,long[],IntervalView<T>> translateRAI

Output parameters:

result

Input parameters:

input

steps

Implementation Note:

op names='transform.translateView'

unshearRA

public final Functions.Arity3<RandomAccessible<T>,Integer,Integer,TransformView<T>> unshearRA

Output parameters:

result

Input parameters:

input

shearDimension

refDimension

Implementation Note:

op names='transform.unshearView', priority='-100.'

unshearRAI

public final Functions.Arity4<RandomAccessible<T>,Interval,Integer,Integer,IntervalView<T>> unshearRAI

Output parameters:

result

Input parameters:

input

interval

shearDimension

refDimension

Implementation Note:

op names='transform.unshearView'

zeroMinView

public final Function<RandomAccessibleInterval<T>,IntervalView<T>> zeroMinView

Output parameters:

result

Input parameters:

input

Implementation Note:

op names='transform.zeroMinView'

Constructor Detail

Transforms

public Transforms()